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tldr/pages/common/pangolin.md

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2024-12-26 10:59:17 +01:00
# pangolin
> Implements the dynamic nomenclature of SARS-CoV-2 lineages (Pango nomenclature).
> More information: <https://cov-lineages.org/resources/pangolin/usage.html>.
- Run `pangolin` on the specified FASTA file:
`pangolin {{path/to/file.fa}}`
- Use the specified analysis engine:
`pangolin --analysis-mode {{accurate|fast|pangolearn|usher}}`