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Bug 187269 - Set the binary parser for the cygwin toolchain to Cygwin PE. Apparently works better with setting global vars in the debugger.
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@ -1671,7 +1671,7 @@
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<targetPlatform
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id="cdt.managedbuild.target.gnu.platform.cygwin.base"
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name="%PlatformName.Dbg"
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binaryParser="org.eclipse.cdt.core.PE"
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binaryParser="org.eclipse.cdt.core.Cygwin_PE"
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osList="win32"
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archList="all">
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</targetPlatform>
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